Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSIVAA
3J7Z Chain:W ((7-85))
------GGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
General information:
TITO was launched using:
RESULT:
Template:
3J7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3269 for 521 contacts (-6.3/contact) +
2D Compatibility (PS) -8309 + (NN) -186 + (LL) 668
1D Compatibility (HY) -4400 + (ID) 2900
Total energy: -18396.0 ( -35.31 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Z-query.scw
PDB file :
Tito_Scwrl_3J7Z.pdb
: