Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEG--GDEGAGKHSLSFAPV---FVYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI |
| 3TDJ Chain:A ((62-121)) | -------------------------------------------------------------GARDADTKIWNGMVGELVYGKADIAIAPLTITYVREEVIDFSKPFMSLGISIMIKKGTPI--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5478 for 222 contacts (-24.7/contact) +
2D Compatibility (PS) -5662 + (NN) -995 + (LL) 6628
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -8507.0 ( -38.32 by residue)
QMean score : -0.258
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