Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 4HE1 Chain:A ((11-325)) | ---LTLTRYVMEKGRQAKGTGELTRLLNSMLTAIKAISSAVRKAGLA-----------------KLDVLSNSLVINMLQSSYSTCVLVSEE-NKDAIITAKEKRGKYVVCFDPLDGSSNIDCLASIGTIFAIYRKTSE-----DEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQGVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDG--SAPYGARYVGSMVADVHRTLVYGGIFLYPANQKSPK--GKLRLLYECNPVAYIIEQAGGLATTGTQPVLDVKPEAIHQRVPLILGSPEDVQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169266 for 2601 contacts (-65.1/contact) +
2D Compatibility (PS) -32472 + (NN) -20862 + (LL) 1972
1D Compatibility (HY) -26400 + (ID) 6400
Total energy: -253428.0 ( -97.43 by residue)
QMean score : 0.551
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