Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
4C3K Chain:E ((1-111))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGR---------------EFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADA-
General information:
TITO was launched using:
RESULT:
Template:
4C3K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58998 for 635 contacts (-92.9/contact) +
2D Compatibility (PS) -10793 + (NN) -3247 + (LL) 1336
1D Compatibility (HY) -10800 + (ID) 2700
Total energy: -85202.0 ( -134.18 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_4C3K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C3K-query.scw
PDB file :
Tito_Scwrl_4C3K.pdb
: