Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
1HI5 Chain:A ((1-135))
--------------------------MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
General information:
TITO was launched using:
RESULT:
Template:
1HI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72395 for 999 contacts (-72.5/contact) +
2D Compatibility (PS) -14306 + (NN) -11448 + (LL) 2556
1D Compatibility (HY) -18000 + (ID) 6700
Total energy: -120293.0 ( -120.41 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1HI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HI5-query.scw
PDB file :
Tito_Scwrl_1HI5.pdb
: