Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEMLPTAILLVLAVSVVAKDNATCDGPCGLRFRQNPQGGVRIVGGKAAQHGAWPWMVSLQIFTYNSHRYHTCGGSLLNSRWVLTAAHCFVGKNNV-HDWRLVFGAKEITYGNNKPVKAPLQERYVEKIIIHEKY---NSATEGNDIALVEITPPISCGRFIGPGCLPHFKAGLPRGSQSCWVAGWGYIEEKAPRPSSILMEARVDLIDLDLCNSTQWYNGRVQPTNVCAGYPVGKIDTCQGDSGGPLMCKDSKESA--YVVVGITSWGVGCARAKRPGIYTATWPYLNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEVLKGKTYSDGKNHYDMETTELPELTSTS |
| 1P57 Chain:B ((1-246)) | ------------------------------------------IVGGRDTSLGRWPWQVSLR---YDGA--HLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGA----VAQASPHGLQLG---VQAVVYHGGYLPF----NSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDG-KICTVTGWGNTQYYGQQ-AGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHS-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185306 for 1966 contacts (-94.3/contact) +
2D Compatibility (PS) -25458 + (NN) -14640 + (LL) 4752
1D Compatibility (HY) -22000 + (ID) 5200
Total energy: -247852.0 ( -126.07 by residue)
QMean score : 0.291
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