Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLCLRASFWLALVGCVISDNPERYSTNLSNHVDDFTTFRGTELSFLVTTHQPTNLVLPSNGSMHNYCPQQTKITSAFKYINTVISCTIFIVGMVGNATLLRIIYQNKCMRNGPNAL---IASLALGDLIYVVIDLPINVFKLLAGRWPFDHNDFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLVTAIEIVSIWILSFILAIPE--AIGFVMVPFEYRGEQHKTCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCE---MLNRRNGSLRIALSE-HLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYNEMDKNRCELLSFLLLMDYIGINLATMNSCINPIALYFVSKKFKNCFQSCLCCCCYQSKSLMTSVPMNGTSIQWKNHDQNNHNTDRSSHKDSMN |
| 4BV0 Chain:A ((19-326)) | -------------------------------------------------------------------------------KVLVTAIYLALFVVGTVGNGVTLFTLARK-------SRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAG---CKGYYFLREACTYATALNVVSLSVELYLAIRHP-----LMSRSRTKKFISAIWLASALLAIPMLFTVGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQLNTFMSFLF----PMLVASILNTVIARRLTVMVH-----------PGRVQALRRGVLVLRAMVIAFVVCWLPYHVRRLM--FVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACL---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208360 for 2048 contacts (-101.7/contact) +
2D Compatibility (PS) -27803 + (NN) -3962 + (LL) 7928
1D Compatibility (HY) -25600 + (ID) 3750
Total energy: -261547.0 ( -127.71 by residue)
QMean score : 0.171
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