Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVSEGTRGCSDRQPGVLTRDRSCSRKMNSSGCLSEEV-GSLRPLTVVILSASIVVGVLGNGLVLWMTVFRMARTVS-TVCFFHLALADFMLSLSLPIAMYYIVSRQWLLGEWACKLYITFVFLSYFASNCLLVFISVDRCISVLYPVWALNHRTVQRASWLAFGVWLLAAALCSAHLKFRTTRKWNGCTHCYLAFNSDNETAQIWIEGVVEGHIIGTIGHFLLGFLGPLAIIGTCAHLIRAKLLREGWVHANRPKRLLLVLVSAFFIFWSPFNVVLLVHLWRRVMLKEIYHP-------RMLLILQASFALGCVNSSLNPFLYVFVGRDFQEKFFQSLTSALARAFGEEEFLSSCPRGNAPRE |
4XT3 Chain:A ((27-316)) | -----------------------------DATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH----ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIPHFMV-VTKKDNQCM-------TDYDYLE------VSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLK--LLKWISSSCEFERSLKRALILTESLAFC--HCCLNPLLYVFVGTKFRQELHCLLAE----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -243850 for 2048 contacts (-119.1/contact) +
2D Compatibility (PS) -28644 + (NN) -9564 + (LL) 4884
1D Compatibility (HY) -36000 + (ID) 4150
Total energy: -317324.0 ( -154.94 by residue)
QMean score : 0.261
|
|
|