Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLINSTDYLINASTLVRNSTQFLAPASKMIIALSLYISSIIGTI-TNGLYLWV-LRFKMKQTVNTLLFFHLILSYFISTMILPFMATSQLQDNHWNFGTALCKVFNGTLSLGMFTSVFFLSAIGLDRYLLTLHPVWSQQHRTPRWASSIVLGVWISAAALSIPYLIFRETHHDRKGKVTCQNNYAVSTNWESKEMQASRQWIHVACFISRFLLGFLLPFFIIIFCYERV-----------ASKVKERSLFKSSKPFKVMMTAIISFFVCWMPYHI---HQGLLLTTNQSLLLELTLILTVLTTSFNTIFSPTLYLFVGENFKKVFKKSILALFESTFSEDSSVERTQT |
| 4EA3 Chain:A ((121-405)) | -------------------------PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILL-GFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDE-EIECLVEIPTPQDY----------WGPVFA-ICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVG---CWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGY-VNSCLNPILYAFLDENFKACFR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221268 for 1965 contacts (-112.6/contact) +
2D Compatibility (PS) -26273 + (NN) -1228 + (LL) 5540
1D Compatibility (HY) -26400 + (ID) 3850
Total energy: -273479.0 ( -139.18 by residue)
QMean score : 0.330
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