Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMEPREAGQHVGAANGAQEDVAFNLIILSLTEGLGLGGLLGNGAV-LWLLSSNVYRNPFAIYLLDVACADLIFLGCHMVAIVPDLLQGRLD---FPGFVQTSLATLRFFCYIVGLSLLAAVSVEQCLAALFPAWYSCRRPRHLTTCVCALTWALCLLLHLLL------------SGACTQFFGEPS-------RHLCRTLWLVAAVLLALLCCTMCGASLMLLLRVERGPQRPPPRGFPGLILLTVLLFLFCGLPFGIYWLSRNLLWYIPHYFYHFSFLMAAVHCAAKPVVYFCLGSAQGRRLPLRLVLQRALGDEAELGAVRETSRRGLVDIAA |
| 2LNL Chain:A ((53-268)) | -------------------------------------SLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLL-----FALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYL-AIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFC---YGFTLRTLFKAHMGQKHRAMR----VIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153138 for 1227 contacts (-124.8/contact) +
2D Compatibility (PS) -19970 + (NN) -8034 + (LL) 3828
1D Compatibility (HY) -25200 + (ID) 3100
Total energy: -205614.0 ( -167.57 by residue)
QMean score : 0.181
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