Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESNQTWITEVILLGFQVDPALELFLFGFFLLFYSLTLMGNGIILGLIYLDSRLHTPMYVFLSHLAIVDMSYASSTVPKMLANLVMHKKVISFAPCILQTFLYLAFAITECLILVMMCYDRYVAICHPLQYT-LIMNWRVCTVLASTCWIFSFLLALVHITLILRLPFCGPQKINHFFCQIMSVFKLAC--AD-TRLNQVVLFAGSAFILVGPLCLVLVSYLHILVAILR----IQS----GEGRR----KAFSTCSSHLCVVGLFFGSAIVMYM-------APKSSHSQERRKILSLFYSLFNPILNPLIYSLRNAEVKGALKRVLWKQRSM |
3UZC Chain:A ((19-303)) | -----------------------------------LAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP--FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIA-ICWVLSFAIGL---TPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLV-PLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -289571 for 1906 contacts (-151.9/contact) +
2D Compatibility (PS) -25960 + (NN) -7925 + (LL) 5000
1D Compatibility (HY) -26000 + (ID) 3700
Total energy: -348156.0 ( -182.66 by residue)
QMean score : 0.327
|
|
|