Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDSNLSDNHLPDTFFLTGIPGLEAAHFWIAIPFCAMYLVALVGNAALILVIAMDNALHAPMYLFLCLLSLTDLALSSTTVP----KMLAILWLHAGEISFGGCLAQMFCVHSIYALESSI--LLAMAFDRYVAICNPLRYTTIL--NHAVIGRIGFVGLFRSVAIVSPFIFLLRRLPYCGHRVMTHTYCEHMGIARLACANITVNIVYGLTVALLAMGLDSILIAISYGFILH-AVFHLPSHDA----QHKALSTCGSHIGIILVFYIPAFFSFLTHRFGHHEVPKHVHIFLANLYVLVPPVLNPILYGARTKEIRSRLLKLLHLGKTSI |
| 4GBR Chain:A ((17-286)) | --------------------------------------LAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTW------TFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARV----IILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEE------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILL-NWIGYVNSGFNPLIY-CRSPDFRIAFQELLCL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248822 for 1882 contacts (-132.2/contact) +
2D Compatibility (PS) -26592 + (NN) -10908 + (LL) 3412
1D Compatibility (HY) -24400 + (ID) 3350
Total energy: -310660.0 ( -165.07 by residue)
QMean score : 0.292
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