Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNMTSIREFILLGFTDNPELQVVIFFFMLITYLLSVSGNMIIIMLTLSNIHLKTPMYFFLRNFSFLEISFTTVFIPRFLINIATGDTTISYNASMAQVFFLILLGSTEFFLLAVMSYDRYVAICKPLHYTTIMSNKVCNWLVISSWLAGFLIIFPPVIMGLQLDFCDSSTIDHFICDSSPMLLIAC--TDTQFLELMAFLLAVFTLMVTLALVVLSYTLILKTILK---------IPSAQQR---KKAFSTCSSHMIVVSVSYGSC----------IFMCVKTSAKEGMALSKGVAVLNTSVAPMLNPFIYTLRNQQVKQALREFTKKILSLNKQ |
| 3RFM Chain:A ((18-305)) | ---------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAI-AIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPM---LGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGL-FALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTN--SVVNPFIYAYRIREFRQTFRKIIRS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228127 for 1905 contacts (-119.8/contact) +
2D Compatibility (PS) -25703 + (NN) -3328 + (LL) 5176
1D Compatibility (HY) -22400 + (ID) 3150
Total energy: -277532.0 ( -145.69 by residue)
QMean score : 0.224
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