Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMEIANVSSPEVFVLLGFSTRPSLETVLFIVVLSFYMVSILGNGIIILVSHTDVHLHTPMYFFLANLPFLDM-----SFTTSIVPQLLAN-LWGPQKTISYGGCVVQFYISHWLGATECVLLATMSYDRYAAICRPLHYTVIMHPQLCLGLALASWLGGLTTSMVGSTLTMLLPLCGNNCIDHFFCEMPLIMQLAC-VDTSLNEMEMYLASFV---FVV---LPLGLILVSYGH----IARAVLKIRSAEGRRKAFNTCSSHVAVVS-------LFYGSIIFMYLQPAKSTSHEQGKF------IALFYTVVTPALNPLIYTLRNTEVKSALRHMVLENCCGSAGKLAQI |
| 3C9L Chain:A ((55-325)) | ------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAP--------PLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF------THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNC---MVTTLCCGKNDDE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159190 for 1723 contacts (-92.4/contact) +
2D Compatibility (PS) -23771 + (NN) 3326 + (LL) 6000
1D Compatibility (HY) -21200 + (ID) 3400
Total energy: -198235.0 ( -115.05 by residue)
QMean score : 0.232
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