Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENNTEVTEFILVGLTDDPELQIPLFIVFLFIYLITLVGNLGMIELILLDSCLHTPMYFFLSNLSLVDFGYSSAVTP---KVMVGFLTGDKFILYNACATQFFFFVAFITAES-FLLASMAYDRYAALCKPLHYTTTMTTN-------VCACL--AIG-SYICGFLNASIHTGNTFRLSFCRSNVVEHFFCDAPPLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFIT----IMKMRSPEGRQKAFSTCASHLTA---VSIFYG-----------TGIFMYLRPNSSHFMGTDKMASVFYAIVI----PMLNPLVYSLRNKEVKSAFKKTVGKAKASIGFIF |
| 4UG2 Chain:A ((12-303)) | ---------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIAC------FVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPM-------NYMVYFNFFACV----LVPLLLMLGVYLRIFLAARRQL-----------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSH----APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210497 for 1739 contacts (-121.0/contact) +
2D Compatibility (PS) -24686 + (NN) -7478 + (LL) 4036
1D Compatibility (HY) -27200 + (ID) 3750
Total energy: -269575.0 ( -155.02 by residue)
QMean score : 0.262
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