Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSPNHT--IVTEFILLGLTDDPVLEKI-LFGVFLAIYLITLA---GNLCMILLIRTNSHLQTPMYFFLGHLSFVDICYSSNVTPNMLHNFLSEQKTISYAGCFTQCLLFIALVITEFYILASMALDRYVAICSPLHYSSRMSKNICVCLVTIPYMYGFLSGFSQSLLTFHLSFCGSLEINHFYCADPPLIMLACSDTRVKKMAMFVVAGFNLSSSL---FIILLSYLFIFAAIFRIRSAE------GRHKAFSTCASHLTIVTLFYGTLFCMYVRPPSEKSV--EESKITAVFYTFLSPMLNPLIYSLRNTDVILAMQQMIRGKSFHKIAV |
| 4LDO Chain:A ((156-461)) | --TPNRAKRVITTF-RTGTWDAYAADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLP--IQMHWYRATHQEAINCYAEE------TCCD-------FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239669 for 2031 contacts (-118.0/contact) +
2D Compatibility (PS) -29115 + (NN) -7972 + (LL) 2584
1D Compatibility (HY) -24800 + (ID) 3550
Total energy: -302522.0 ( -148.95 by residue)
QMean score : 0.226
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