Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGNQTHAQEFLLLGFSATSEIQFILFGLFLSMYLVTFT-GNLLIILAICSDSHLHTPMYFFLSNLSFADLCFTSTTVPKMLLNILTQNKFITYAGCLSQIFFFTSFGCLDNLLLT-------VMAYDRFVAVCHPLHYTVIMNPQLCGLLVLGSWCISVMGSLLETLTVLRLSFCTEMEIPHFFCDLLEVLKLACSDTFINN-------VVIYFATGVLGVISFTGIFFSYYKIVFSILRISSAGRKHKAFSTCGSHLSVVTLFYGTGFGVYLSSAATPSSRTSLVASVMYTM------VTPMLNPFIYSLRNTDMKRALGRLLSRATFFNGDITAGLS |
| 4GBR Chain:A ((1-284)) | --------------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT--KTWTFGNFWCE--FWTS---IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLP----IQMHWYRATHQEAINCYAEE----TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCL--KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI----QDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186201 for 1816 contacts (-102.5/contact) +
2D Compatibility (PS) -25580 + (NN) 3505 + (LL) 3392
1D Compatibility (HY) -29600 + (ID) 3650
Total energy: -238134.0 ( -131.13 by residue)
QMean score : 0.164
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