Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLCHRGGQLIVPIIPLCPEHSCRGRRLQNLLSGPWPKQPMELHNLSSPSPSLSSSVLPPSFSPSPSSAPSAFTTVGGSSGGPCHPTSSSLVSAFLAPILALEFVLGLVGNSLALFIFCIHTRPWTSNTVFLVSLVAADFLLISNLPLRVDYYLLHETWRFGAAACKVNLFMLSTNRTASVVFLTAIALNRYLKVVQPHHVLSRASVGAAARVAGGLWV-GILLLNGHLLLSTFSGPSCLSYRVGTKPSASLRWHQALYLLEFFLPLALILFAIVSIGLTIRNRGLGGQAGPQRAMRVLAMVVAVYTICFLP---SIIFGMASMVAFWLSAC---RSLDLCTQLFHGSLAFTYLNSVLDPVLYCFSSPNFLHQSRALLGLTRGRQGPVSDESSYQPSRQWRYREASRKAEAIGKLKVQGEVSLEKEGSSQG |
4XT3 Chain:A ((26-316)) | ----------------------------------------------------------------EDATPCVFTDVLNQSKP---------VTLFLYGVV---FLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH-----ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRY----RPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRIS---RIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKR-ALILTESLAFC--HCCLNPLLYVFVGTKFRQELHCLLAE--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204983 for 2064 contacts (-99.3/contact) +
2D Compatibility (PS) -29273 + (NN) -17458 + (LL) 6620
1D Compatibility (HY) -35200 + (ID) 4050
Total energy: -284344.0 ( -137.76 by residue)
QMean score : 0.162
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