Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESALPSIFTLVIIAEFIIGNLSNGFIVLINCIDWVSKRELSSVDKLLIILAISRIGLIWEILVSWFLALHYLAIFVSGTGLRIMIFSWIVSNHFNLWLATIFSIFYLLKIASFSSPAFLYLKWRVNKVILMILLGTLVFLFLNLIQINMHIKDWLDRYERNTTWNFSMSD--FETFSVSVKFTMTMFSLTPFTVAFISFLLLIFSLQKHLQKMQLNYKG------------------------------------------------------------------------------------------------------------------------------------------------------HRDPRTKVHTNALKIVISFLLFYASFFLCVLIS-WISE-L------------YQNTVIYMLCETIGVFSPSSHSFLLILGNAKLRQAFLLVAAKVWAKR |
| 3ODU Chain:A ((47-497)) | ----NKIFLPTIYSIIFLTGIVGNGLVILVMGYQK---KLRSMTDKYRLHLSVADLLFVIT-LPFWAVDAV-ANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV---HATNS-QRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVS--EADDRYICDRFYPNDLWVVVF--QFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -234574 for 2028 contacts (-115.7/contact) +
2D Compatibility (PS) -28294 + (NN) -2931 + (LL) 1384
1D Compatibility (HY) -12800 + (ID) 1800
Total energy: -279015.0 ( -137.58 by residue)
QMean score : 0.204
|
|
|