Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFIPIIFSSVVVVLFVIGNFANGFIALVNSIERVKRQKISFADQILTALAVSRVGLLWVLLLNWYSTVFNPAFYSVEVRTTAYNVWAVTGHFSNWLATSLSIFYLLKIANFSNLIFLHLKRRVKSVILVMLLGPLLFLACQLFVINMKEIVRTKEYEGNLTWKIKLRSAVYLSDATVTTLGNLVPFTLTLLCFLLLICSLCKHLKKMQLHG-KGSQDPST---KVHI-KALQTVIFFLLLCAVYFLSIMISVWSFGSLENKPVFMFCKAIRFSYPS--IHPFILIWGNKKLKQTFLSVLRQVRYWVKGEKPSSP |
| 3VG9 Chain:A ((187-309)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS--HVLR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62799 for 606 contacts (-103.6/contact) +
2D Compatibility (PS) -12116 + (NN) -7294 + (LL) 17612
1D Compatibility (HY) -12000 + (ID) 1500
Total energy: -78097.0 ( -128.87 by residue)
QMean score : 0.228
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