Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV---IFFIE-FIMCSANCAILLFINELELWLATWLGVFYCAKVASVRHPLFIWLKMRISKLVPWMILGSLLYVSMICVFHS--KYAGFMVPYFLRKFFSQN----ATIQKEDTLAIQIF-SFVAEFSVPLLIFLFAVLLLIFSLGRHTRQMRNTVA----------------------------------------------------------------------------------------------------------------------------------------------------GSRVPGRGAPISALLSILSFLILYFSHCMIKVFL-SSLK---FHIRRFIFLFFILVIGIYPSGHSLILILGNPKLKQNAKKFLLHSKCCQ |
| 2RH1 Chain:A ((40-477)) | -----VVGMGIVMSLIVLAIVFGNVLVITAIAKFE---RLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAIT---SPFKYQ-SLLTKNKARVIILMVWIVSGLTSFLPIQMHWY----R--ATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239766 for 2056 contacts (-116.6/contact) +
2D Compatibility (PS) -27805 + (NN) -10187 + (LL) 2284
1D Compatibility (HY) -15200 + (ID) 1600
Total energy: -292274.0 ( -142.16 by residue)
QMean score : 0.274
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