Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLCIILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEATRNVTEHFRKKRSEYYLIHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPA--------GHSFILILGNSKLKQTFVVMLRCESGHLKPGSKGPIFS |
| 2X72 Chain:A ((196-327)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TPH-EETNNESFVIYMF-VVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESAT-----TQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF---THQGSCFGPIF-MTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -49619 for 650 contacts (-76.3/contact) +
2D Compatibility (PS) -12180 + (NN) 2282 + (LL) 14536
1D Compatibility (HY) -6800 + (ID) 600
Total energy: -52381.0 ( -80.59 by residue)
QMean score : -0.102
|
|
|