Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFHVSKIPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLWRHTKQI-----KLYATGSRDPSTEVHVR------AIKTMTSFIFFFFLYYISSILMTFSYL--MTKY--KLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
| 4WW3 Chain:A ((194-328)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57056 for 610 contacts (-93.5/contact) +
2D Compatibility (PS) -11538 + (NN) 5717 + (LL) 17420
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -55907.0 ( -91.65 by residue)
QMean score : 0.172
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