Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFF-GSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIIS-PS-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF-CCTLRLPPVKRGQSSVCHTALFLFAHELH-PQ--ETVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYLSA--FTQ---P----------------------------------------------------------------------------------------------------------------------------------------------------ACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI-NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 2RH1 Chain:A ((40-477)) | -----------------------------------------VVGMGIVMSLIVLAIVFGNVLVITAIAKF---ERLQTVTNYFITSLACADLVMGLAV-VPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQ----SLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEA--INCY------AEETCCDFFTNQAYAIASSIVSFYV----PLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192399 for 2033 contacts (-94.6/contact) +
2D Compatibility (PS) -27793 + (NN) -4375 + (LL) 7236
1D Compatibility (HY) -13600 + (ID) 1350
Total energy: -232281.0 ( -114.26 by residue)
QMean score : 0.236
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