Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFP---AAIILKVALNMARGLKYLH--QEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAAL--GTRPPINMEELDESYQKVIE-LFSVCTNEDPKDRPSAAHIVEALETDV |
| 4L53 Chain:A ((46-259)) | ------------------------------------------------------------------------------RKAFIVELRQLSRVNHPNIV---KLYGACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT-----------KGSAAWMAPE-------VFEGSNYSEKCDVFSWGIILWEVIT--------------RRKPFDEIGGPAFRIMWAVHNGTRPP-----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75948 for 1440 contacts (-52.7/contact) +
2D Compatibility (PS) -21854 + (NN) -21802 + (LL) 5712
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -136692.0 ( -94.93 by residue)
QMean score : 0.426
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