Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACAATTSLL-ACLPATQSDIMPSATCCTQLSSYVA------NNGQDCLCSASTSNT---ARSDLALKLPQKCNLKFK----AGTTCNVIPGGQ
2ALG Chain:A ((4-91))
-CGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30761 for 462 contacts (-66.6/contact) +
2D Compatibility (PS) -7293 + (NN) -255 + (LL) -220
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -42629.0 ( -92.27 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: