Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYLICLKNLIREVIEGKVKEVVIDKGNKYYQVSKNTDKELLDGIMCKSKLKTKLLHSVK
2G9L Chain:A ((17-33))
--------------------------------LVKGAAQGVLSTVSCKLAKTC-------
General information:
TITO was launched using:
RESULT:
Template:
2G9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 920 for 67 contacts (13.7/contact) +
2D Compatibility (PS) -1760 + (NN) -468 + (LL) 3616
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 508.0 ( 7.58 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_2G9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G9L-query.scw
PDB file :
Tito_Scwrl_2G9L.pdb
: