Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCNQQTRVLISTILCRIAIWYDHMLFIDLVNIISREFCSAKDVYYNILQLFGIAGLGAMVRPLGASVFGHIGDRYGRKMALTIAILLISIPSSLVAFIPGYSRVGITSTILLFAIHVTQGIALGAEQGGSSVYLIEHLSNKKKLGMFFGIISFGRSIGVLLFVMIVIICKKITDFNAW----GWRMPFTFSAIWGLMSAYSIYTLGETPAYEKNREQRNLPNLPIIELVKRYKRALILAVLISVPVNVAVGFTIFLRTIAKEIVQVEMYVTTYVNEIVLIITSILIPISSIALGMLADRVGKERIAILFIIITIILCCPMLSIAYYYKSYLIIMLSVMALSIIERGINPIGIVASELFPPNVRFSGVSLSRNISFALHGGFTPMICTWLTITFPQINFVAGLYIIFCLLISLIAILQIKSQDKNFDW |
| 2Q06 Chain:A ((184-266)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------KGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKG-KFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45340 for 519 contacts (-87.4/contact) +
2D Compatibility (PS) -8105 + (NN) -756 + (LL) 12424
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -47227.0 ( -91.00 by residue)
QMean score : 0.394
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