Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYIDIIKSRLLLSDIVGKKVRLTKRGDSFVGFCPFHSEKTPSFLVSNTKGSYHCFGCSAHGDVFNFISQTEGLSFKEALERLASVVGVELPKTLNLAKENGELFSTLNLAASWFVQKNQGIIAYLKQRKISPKIIDKFKVGYAPSSGLKEYLNSLGIED---KILIDVGLINKN----SRDYFCNRLIFPIYNIAGKVIGFGGRALSSKQQPKYLNSPESQLFKKRENLYGLNFALSEIHKKQHVFVVEGYMDVIALHQTGISNIVAPLGTAISAEQIKSLWKFAKEISICMDGDSAGRNAAIRVAELVLPILEPGYTLKFVTLPTDKDPYDVCNELEHKKETVLSALDHSTKLHSEYLWHYIIGSNLQNYEKLAPEKYSILERKFMEYVNAIGNSSIRRYYRDYFYDKASELRNSFKKQVFNNKTRATKSEYLYNKSPELIEAEQNQAIILRITLEFPEILNHPIYFEQFSHFEFTNVKIKRLQQHIINVANNGSELNKEVLLQELEQFNVDGTIKLIFEKTSILNSQLNNGKSAKTVWNNIVLRGELNVLQRERIEARLGGDFGLEERLIEQIEQIESNIREMQMEFIQK |
1EQN Chain:A ((142-346)) | ----------------------------------------------------------------------------------------------------------------------------YLEKRGLSHEVIARFAIGFAPP-GWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48605 for 1371 contacts (-35.5/contact) +
2D Compatibility (PS) -19365 + (NN) 6317 + (LL) 21508
1D Compatibility (HY) 3200 + (ID) 1250
Total energy: -38195.0 ( -27.86 by residue)
QMean score : 0.228
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