Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGN-ISGTAVALKTGGPGSILWMAIIVIITSVIKYVTC----YLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINV-----PV-VTG-GIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 2JLN Chain:A ((22-184)) | ---------------------------------------------YAERSVGPFSLAAIWFAMAIQVAIFIAAGQMT---SSFQ-VWQVIVAIAAGCTIAVILLFFTQSAAIRWG-I---NF----TVAARMPFGI-RGSLIPITLKAL-LSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTT-FYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65478 for 777 contacts (-84.3/contact) +
2D Compatibility (PS) -15032 + (NN) -1525 + (LL) 5312
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -82273.0 ( -105.89 by residue)
QMean score : -0.005
|
|
|