Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNIKTISVKDNNV--RLDRYIRRIFPNLKQSVIEKSL--RRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGI-----KVKISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNSPQDATTRFSIIAKFKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
| 2IST Chain:A ((7-220)) | -----TATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCD-KPKEKVLGGEQVAIN-----AEIE---RFEPQDIPL---DIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRTHMAVHPMGKP--AVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDW--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52767 for 1251 contacts (-42.2/contact) +
2D Compatibility (PS) -21331 + (NN) -2326 + (LL) 5808
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -85416.0 ( -68.28 by residue)
QMean score : 0.430
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