Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKLFFIFTLLFFDASTYCSCEDIIESIEICKEYTCQQYIGNEDFIEHKILGLSSKDLCVYIEKQDNDEMVCHHSKYGMMMEKKYLESIFKVGNQEINDFIDIANLRAKECFFISNQKTSYTNRDYIIKE------AVESNFDVLSQYNDI----------KSIFFDKESVNKMVSEMKKFNLRSSRAAKEEILDNFNSKVVSLD------SILYLSPDTWKIWVNRKLFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYGNIMFTLYPKQKFDLDSLSIK |
| 1TDN Chain:A ((147-278)) | ---------------------------------------------------------------------------SEEGKSAGQLYEESLGKV----------VEELKRTNCSYILNKYDTYSTKEYLLKEGNLSPGAVDMIGDLMNEDSGYYVSFPESLRHDDIFAYEKRFDEIVGGMDKLPTSMYRAIEEKV--HLNAQVIKIQKNAEKVTVVYQTPAKEMASVTADYVIVCTTSRATRRIKFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFWEDEGIHGGKSTTDLPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5938 for 551 contacts (-10.8/contact) +
2D Compatibility (PS) -11062 + (NN) -1279 + (LL) 6680
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -20699.0 ( -37.57 by residue)
QMean score : 0.171
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