Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLITLTYNNFKQYAQQGTVPAVEQNNGSKVLQNSFYKSVYYINSVLWPIKGMLVGVKHDLNTSGITMGRREKVVWGTDAMIAILALQIYYLYSIQELHILCTCQKNYFHISKEQKARNLS |
2GZX Chain:A ((195-209)) | --------------------------------------------------------------------SMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138 for 39 contacts (-3.5/contact) +
2D Compatibility (PS) -1498 + (NN) 185 + (LL) 4248
1D Compatibility (HY) -800 + (ID) 200
Total energy: 1797.0 ( 46.08 by residue)
QMean score : -0.192
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