Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNLLKKFNEQQMQVLAKEVPEFRPGDDLKVTFKVVDSTSERIQIFEGVCISKRNRGLHSSFAVRKVSHGESIVSQFFIYSPALVSVQVTRRGKVRRAKLYYLCKLFGKAARIKERATYKNNKSN
3BBX Chain:P ((1-112))
-SNIIKQLEQEQMK---QDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN-------
General information:
TITO was launched using:
RESULT:
Template:
3BBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8501 for 707 contacts (12.0/contact) +
2D Compatibility (PS) -10886 + (NN) 2568 + (LL) 976
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -10641.0 ( -15.05 by residue)
QMean score : 0.062
(partial model without unconserved sides chains):
PDB file :
Tito_3BBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBX-query.scw
PDB file :
Tito_Scwrl_3BBX.pdb
: