Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMVEQKDKYRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDK--AKIIAKNKDWIYYNLPEEVI-----PTCWNGRYSGQKQRWFLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGAIPFKKEVYKTVIEEFSSQIKVSIIK
2KDV Chain:A ((5-155))-----DGYRPNVGIVICNRQGQVMWARRFGQHS-WQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVC-----IGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQEN


General information:
TITO was launched using:
RESULT:

Template: 2KDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -60325 for 1055 contacts (-57.2/contact) +
2D Compatibility (PS) -15598 + (NN) -9447 + (LL) 876
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -104594.0 ( -99.14 by residue)
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_2KDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KDV-query.scw
PDB file : Tito_Scwrl_2KDV.pdb: