Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY
1GXN Chain:A ((537-584))
--------------------------------------------------------------------VGVLAFLMTQPQTAEIEQAVRAGVAWFNSPRTYLEGYTYDSSLAATNP---------
General information:
TITO was launched using:
RESULT:
Template:
1GXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3215 for 201 contacts (16.0/contact) +
2D Compatibility (PS) -5156 + (NN) -5452 + (LL) 6464
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -5129.0 ( -25.52 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1GXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GXN-query.scw
PDB file :
Tito_Scwrl_1GXN.pdb
: