Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLNNLNCCTKFGIELEFYTEGIEREHLFLNSVKNKIALLGFSCKKESSTHQYEIKSGCYNDS----NNLIKHFD---LAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNE-QKYSDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLGSKC--RLEHRVPGADCNLEKVLIAIIEGITFGIENKIAPPNRVYGIASDPQYKMENLV |
| 1LGR Chain:A ((208-388)) | --------------------------------------------------AHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLA-KNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRL-VP----PVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDIPQVAGSLEEALNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83812 for 1200 contacts (-69.8/contact) +
2D Compatibility (PS) -17471 + (NN) -6391 + (LL) 3864
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -113210.0 ( -94.34 by residue)
QMean score : 0.392
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