Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNAIKLNSIFTELSKKKKPKLIGRGIGCGKGKTSGRGHKGQKARSGTSI-NGFEGGQQSIYTRLPKRGFNPIRRNICSIINVGDVQRLIEAKKIEKNSVIDKEILHKLGFIKSIKDKIKLLNKGKLNERCVFHVDFASEAAKKSVTSIGGSVEILS
3BBX Chain:L ((1-143))
----MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKV-------EGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE--
General information:
TITO was launched using:
RESULT:
Template:
3BBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7168 for 748 contacts (-9.6/contact) +
2D Compatibility (PS) -14619 + (NN) 1480 + (LL) 1460
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -26597.0 ( -35.56 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_3BBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBX-query.scw
PDB file :
Tito_Scwrl_3BBX.pdb
: