Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEDIINKLKQACSSQDVEITKSDLSKIFDALMKIIKGKLDEEGEIRLHGIGTFSTAISQEKQCRNPQNGEIMTVPQKTRVKFKASQTLLSILNKEKEEVIS
1HUU Chain:A ((1-85))
MNKTELINAVAETSG-----LSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAAR----------MEIPASKVPAFKPGKALKDAVK--------
General information:
TITO was launched using:
RESULT:
Template:
1HUU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13395 for 394 contacts (-34.0/contact) +
2D Compatibility (PS) -7907 + (NN) -128 + (LL) 1224
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -26006.0 ( -66.01 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1HUU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HUU-query.scw
PDB file :
Tito_Scwrl_1HUU.pdb
: