Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISLLLVVLLFFCGDDAFAKQEPRSIAAD--SHIKVINYNPQAIHKYTGFYGYQSSILFEPGETIQNLSMGDPTGWQLVPQGNRLFIKPIDDIADTNATVITNKRVYYFELHAEEATGLDDPRLAYEVRFLYPLFSSDEIYTTNNGDILEQANPTTIPDINDIEVVKKGINFNYSISHVKGSQSIIPTKAFDDGRFTYLQFNKVNSDFPAVFMVDSAGYESLVNFRTVDDYLIIERVGSVFTLRNGSSTVCLFNENMPFAKGKR |
5A0T Chain:A ((229-308)) | -----------------FANARKRIIVASFASHVHRIQQILDAAHEYG------RRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPDSEVVLVCTGSQGEPMAALSRMANRDHQIRIVNGDTVILASSLIPGNENAVYRVINGLTRWGANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVDGLS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14818 for 520 contacts (-28.5/contact) +
2D Compatibility (PS) -7857 + (NN) 871 + (LL) 3424
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -24230.0 ( -46.60 by residue)
QMean score : 0.332
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