Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFAVIETGGKQYLVKKGSVIKVEKLEAEEGKEVEIDKAVCLSGNGLSYLTDA---TVKAEVLEQCRGEKIIIFKKKRRKNYRRKTGHRQYITVLRINEINLQK
1XBP Chain:P ((1-95))
MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVEL-KALFVGGEQTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG--
General information:
TITO was launched using:
RESULT:
Template:
1XBP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 551434 for 3081 contacts (179.0/contact) +
2D Compatibility (PS) -7306 + (NN) 8513 + (LL) 40
1D Compatibility (HY) -800 + (ID) 450
Total energy: 551431.0 ( 178.98 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1XBP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XBP-query.scw
PDB file :
Tito_Scwrl_1XBP.pdb
: