Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHQETTSQQYNFSIIKHGDISTPQGFTAGGMHIGLRANKKDFGWIYSSSLASSAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGIDDARQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHIKDTNFATPGAFNEAILTTDTCTKHIAVSLKIDGKTVTIGGSAKGSGMIHPNMATMLAFITTDASIESNTLHQLLKSSTDHTFNMITVDGDTSTNDMVLVMANHQVEHQILSQDHPQWETFVDAFNFVCTFLAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIITAIGYSG--CEIDPKCTYVQLNQIPVV------DKGMAVLFDEQAMSNTLTHEHVTIDVQLGLGNAAATAYGCDLSYDYVRINASYRT |
2VZK Chain:B ((1-213)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANG------LAGEVDAGE-FEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQADDAL--RAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSEYTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134201 for 1547 contacts (-86.7/contact) +
2D Compatibility (PS) -21838 + (NN) -5351 + (LL) 12592
1D Compatibility (HY) -12800 + (ID) 4000
Total energy: -165598.0 ( -107.04 by residue)
QMean score : 0.380
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