Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKVLVVDDEHSIVTLLKYNLETAGYEVVVAFDGDEALEKVESEQPDLIILDVMLPKKDGIDVCKTVRTNKNLVPILMLTAKNDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRRSQFVKEVEEIDDDITIGSIRIRPDYFEVYKHNELLELTPKEFELLLYLIERQGRVITREHMLNTVWNYEFAGDSRIVDVHISHLRDKLEDNPKKPQLIKTVRGLGYKLERPKEQ
1NXO Chain:A ((2-120))
--KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLM---IDGLEVAKTIRKTSS-VPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQ----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78684 for 916 contacts (-85.9/contact) +
2D Compatibility (PS) -12851 + (NN) -8798 + (LL) 8972
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -109911.0 ( -119.99 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_1NXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXO-query.scw
PDB file :
Tito_Scwrl_1NXO.pdb
: