Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEQQTIEQIKARLNKFIEDIDHVNPDEV-RVEDIDEWIGLLDQLEEKVKLVSK
1OXZ Chain:A ((217-260))
-----AIEEVNNNVKLLTEMVMSHSQGGAAAGSSE----DLMKELYQRCERMR-
General information:
TITO was launched using:
RESULT:
Template:
1OXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3380 for 206 contacts (-16.4/contact) +
2D Compatibility (PS) -4745 + (NN) -3238 + (LL) 924
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -12289.0 ( -59.66 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1OXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OXZ-query.scw
PDB file :
Tito_Scwrl_1OXZ.pdb
: