Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIIVGFLSWFISAVCIFEAVEFIAQKRLEKHSWKAGKSNSK
3H2X Chain:A ((216-247))
--------------------------------------------------QEDDSVPICIHCSAGCGRTGVICAIDYTWMLL-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13531 for 136 contacts (-99.5/contact) +
2D Compatibility (PS) -3340 + (NN) -750 + (LL) 9484
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -11987.0 ( -88.14 by residue)
QMean score : -0.111
(partial model without unconserved sides chains):
PDB file :
Tito_3H2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H2X-query.scw
PDB file :
Tito_Scwrl_3H2X.pdb
: