Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLTAVTNNIAFSQKERH
4AIN Chain:A ((412-510))
------------------------------------------------------------------IMGIIAMILLGTF--FITSADSASTVMGTMSQHGQLEANKWVTAAWGVATAAIGLTLLLS-----LSNLQNVTIVAATP-FLFVVIGLMF---ALVKDLSNDVIYLEYREQ
General information:
TITO was launched using:
RESULT:
Template:
4AIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21952 for 467 contacts (-47.0/contact) +
2D Compatibility (PS) -9826 + (NN) -6099 + (LL) 8420
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -38857.0 ( -83.21 by residue)
QMean score : -0.023
(partial model without unconserved sides chains):
PDB file :
Tito_4AIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AIN-query.scw
PDB file :
Tito_Scwrl_4AIN.pdb
: