Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFEMRKIAFNAPKAFSLEHEGVVLEGEIVRVGAKLFRLKARLKGELMLICDTSGK---EFKKSLDESLVLHISDGLWDTQSQSLDFDNLDVIESFNGFIDLSEILRSEVESIKLDYHYAD
1WAE Chain:A ((116-179))
------------------------------------LRFKADRSGTFVYVCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDT
General information:
TITO was launched using:
RESULT:
Template:
1WAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2951 for 242 contacts (-12.2/contact) +
2D Compatibility (PS) -6115 + (NN) 93 + (LL) 3404
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -12019.0 ( -49.67 by residue)
QMean score : 0.128
(partial model without unconserved sides chains):
PDB file :
Tito_1WAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAE-query.scw
PDB file :
Tito_Scwrl_1WAE.pdb
: