Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLIKVSGDKKVIEVSIPLTSISGKARVKIRHAFSDYGISTATRKIPFSLKHYVEWQIGYDVPIKDKEKFELTTLKDEKYHFLGANNKVKTLYELSEMIYYAKRLGLISLENLENTLKFLEKQKQFIE-DNFMITRERFRSHQFGGMDFELSRISYPLLIHSFDDNELSEIVIKEQQYGSKTQAMLYFCFSILELKTATPLLNRTAMPKEHALLIIHETNALVFLEMLKIFGLLSQVHHNDVLKILEKILQN |
4JE5 Chain:A ((239-306)) | ----------------------------------------------------------------KIAQKYDFLIVEDEPYYFLQMNPYIKDLKEREKAQSSPKQDHDEFLKSLANTFLSLDTEGRVIRMDSFSKVLAPGTRLGWITGSSKILKPYLSLHEMTIQAPAGFTQVLVNATLSRWGQKGYLDWLLGLRHEYTLKRDCAIDALYKYLPQSDAFVINPPIAGMFFTVNIDASVHPEFKTKYNSDPYQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17457 for 312 contacts (56.0/contact) +
2D Compatibility (PS) -6826 + (NN) 1388 + (LL) 4612
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 13631.0 ( 43.69 by residue)
QMean score : 0.031
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