Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMVLNVAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSL----RDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKIKEVESKNKALNK |
2GQ0 Chain:A ((273-401)) | ---------------------------------------------------------------------------------------------------EYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTR------------NLRN--ALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15252 for 885 contacts (-17.2/contact) +
2D Compatibility (PS) -12678 + (NN) 1400 + (LL) 10736
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: -25294.0 ( -28.58 by residue)
QMean score : 0.053
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