Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKDFLEDYKKSVLERKSEGIPPLPLNAKQVEAVVEILMKDPTNAAFAKELLIHRVSPGVDEGAKVKAEFLAQLSQKKLECPHISALEATTLLGTMLGGYNVEPLIVGLESQDKNIAKESAKALKTTLLVYGSFDKIAAMSKTNALAKEVLESWANAEWFLNKEPLNECIEACVFKIDGETNTDDLSPASDAFTRSDIPLHAKAMLKNRIENYEQRIEAIKTKGVPVAYVGDVVGTGSSRKSATNSIMWHFGKDIPFVPNKRSGGIVIGGVIAPIFFATCEDSGALPIVADVKDLKEGDIIKIYPYKGEITLNDKVVSTFKLEPETLLDEVRASGRIPLIIGRGLTNKARKFLGLGESEAFKKPSAPKSDAKGYTLAQKIVGHACGVKGILPGAYCEPKVTTVGSQDTTGAMTRDEVKELASLKFDAPFVLQSFCHTAAYPKPSDVSLHATLPGFITQRGGVALHPGDGVIHTW-LNRMGLPDTLGTGGDSHTRFPLGISFPAGSGLVAFAA-VTGTMP--LNMPESVLVRFKGEMNPGITLRDLVNAIPYYAIKKGLLTVEK-KGKINVFNGRILEIEGLPDIKMEQAFELSDASAERSAAACVVRLNKEPMIEYLKSNIKLIDEMIASGYEDKETLKKRRDAMQAWVDKPVLLEPDSNAQYAAVIEIDVAEITEPILACPNDPDDVATLSEV--LADTTGKRPHAIDEVFIGSCMT----NIGHFRAFG-EIVKNAPPSQARLWVVPPSKMDEQELINEGYYAIFGAAGARTEVPGCSLCMGNQARVR----DNAVVFSTSTRNFDNRMGRG--AKVYLGSAELGAACALLGRIPTKEEYMNLVSEKLESQKDKIYRYMNFNLMENFRL
1AMI Chain:A ((141-478))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKV------AGILTVKGGTGAIVEYHG-----PGVDSISCTGMATICNMGAEIGATTSVFPYNHR-MKKYLSKTGRADIANLADEFKDH-------------------LVPDSGCHYDQLIEINLSEL-KPHINGPFTPDLAHPVAEVGSVAEKEG-WPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPG


General information:
TITO was launched using:
RESULT:

Template: 1AMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -120779 for 2791 contacts (-43.3/contact) +
2D Compatibility (PS) -34890 + (NN) -21671 + (LL) 32304
1D Compatibility (HY) -14400 + (ID) 4250
Total energy: -163686.0 ( -58.65 by residue)
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_1AMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AMI-query.scw
PDB file : Tito_Scwrl_1AMI.pdb: